Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015929967.1_cds_XP_016477148.1_68912
CDS Infomation

[gene=LOC107798642] [db_xref=GeneID:107798642] [protein=protein IQ-DOMAIN 1-like] [protein_id=XP_016477148.1] [location=complement(join(30490..31155,31873..31992,32519..32740,32841..33161,33252..33326))] [gbkey=CDS]
Sequence

ATGGGGAGGAAAGGAAGCTGGTTTTCTTCTGTAAAGAAGGCTCTGAGCCCTGATCCTAAG
GAAAAGGCAGACAAGAAAGCAAGTAAATCAAAGAAGAAATGGTTCGGGAAAGAAAAGCAG
ACGCTCCCCGATTCTTCGACTGTGGTGACCGCCACGGTGTCGCCTCCTCGTCCTGCCCCT
CCTGTGGAAGAGATCAAATTTGATGAAGTGGAAGAGGAGCAGACGAAACATGCTTATTCC
ATCGCAGTTGCCACAGCTGCTGCTGCTGAAGCTGCTGTTGCAGCTGCCCATGCTGCTGCA
GAGGTTGTTCGATTAACTACAGTAAACCAATTCGCTGGTAAATCAAATGAAGAAGTAGCT
GCAATCCGAGTTCAGACTGCCTTTCGAGGTTATCTGGCGAGGAGGGCATTGAGGGCATTA
AGAGGACTTGTCAGACTCAAATCACTTGTCGATGGACCTACTGCCAAACGACAAACGGCA
AATGCTCTCAAATGCATGCAGGCTTCATCTCGTGTTCAATCTCAGATTAGTTCTAGAAGG
ATCAGGATGCTGGAGGAGAACCGAGCTCTCCAGAGGCAGCTTATGCAGAAGCATGCGAAA
GAACTCGAGAGTTTGAGGAGAGAAGAGGAATGGGATGATAGTCTACAATCACAGGAGCAG
GTTGAAGCTAGCTTGCTCAGCAAATATGAAGCTGCAATTAGACGAGAAAGAGCACTTGCG
TATTCATATTCTCACCAGCAAACCTGGAAGAAATCATCAAGATCTGCCAATTTGTTGTTT
ATGGATCCAACCAATCCTCAGTGGGGTTGGAGCTGGCTAGAGCGATGGACAGGTGCTAGG
CCTTGGGAAACTCAAAGCTTATCTGAGAAAGAACGTAAAAATGATCAGATGTCTGTTAGA
AGCATGAGCATTACTGGAGGAGAAATTGCCAGGGCGTTTGCCCGTCATCAGCTGAATTCT
GAACTCCCTTCATCCCCTACTACTCCTTCGAAGCCAGCCACTTCAGTAACAGCGAGAAAA
CTGAAATCAGCAAGCCCAAGAGTTAGTGCAATAAACCAAGATGATGATGATGCTCGAAGC
ATGTTTAGCGTGCAATCAGAACGGAACAGGAGGCATAGCATTGCAGGGTCATCTATAAGA
GACGATGAGAGCTTGGCGAGCTCTCCCTCAGTCCCAAGTTACATGGCCTCTACGAAGTCT
GCAAAAGCAAAAACACGGTTGCAGAGTCCATTGGGCGTGGAGAACGGCACACCACAAAAG
GGATCAGCAGGGCCTGTGAAGAAGCGGCTCTCTTATCCACCTTCACCTGCCCGGCCAAGG
CGGCATTCAGGCCCACCAAAAATTAACAACACCTCATTTAACACCTCCATCGTTGAGGAT
AATGTGAATGTTGTCGTCAACTAA

Peptide Sequence

PEP ID

XP_016477148.1
PEP Infomation

PREDICTED: protein IQ-DOMAIN 1-like [Nicotiana tabacum]
Sequence

MGRKGSWFSSVKKALSPDPKEKADKKASKSKKKWFGKEKQTLPDSSTVVTATVSPPRPAP
PVEEIKFDEVEEEQTKHAYSIAVATAAAAEAAVAAAHAAAEVVRLTTVNQFAGKSNEEVA
AIRVQTAFRGYLARRALRALRGLVRLKSLVDGPTAKRQTANALKCMQASSRVQSQISSRR
IRMLEENRALQRQLMQKHAKELESLRREEEWDDSLQSQEQVEASLLSKYEAAIRRERALA
YSYSHQQTWKKSSRSANLLFMDPTNPQWGWSWLERWTGARPWETQSLSEKERKNDQMSVR
SMSITGGEIARAFARHQLNSELPSSPTTPSKPATSVTARKLKSASPRVSAINQDDDDARS
MFSVQSERNRRHSIAGSSIRDDESLASSPSVPSYMASTKSAKAKTRLQSPLGVENGTPQK
GSAGPVKKRLSYPPSPARPRRHSGPPKINNTSFNTSIVEDNVNVVVN

Transcript Sequence

Gene sequence data has not been registered.